Automated Multi-Locus Species Tree

Upload sequence(s) for automatic generation of species phylogeny with reference organisms

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Overview

Rapid ANI estimation

Netork depicting ani distances

Nearest reference organisms (GTDB) are identified and collated.

MLST gene selection

Selection of mlst genes

Single copy genes are identified and prioritized.

Tree building

Example tree output

Phylogeny is built using all MLST genes from query and reference organisms using either a concatenated gene or coalescent tree method.